RCIF
  • AFNI
  • AMBER
  • ANTS
  • Apptainer
  • CMAKE
  • CUDA
  • CUDNN
  • DCMTK
  • DRAMMS
  • Elastix
  • FastQC
  • FFMPEG
  • FREESURFER
  • FSL
  • GATE
  • GNU C Compiler
  • GEANT4
  • GO
  • GREEDY
  • Intel Compilers
  • ITK-SNAP
  • Jupyter Notebook
  • MATLAB Compiler Runtime
  • MATLAB Interactive
  • MATLAB Parallel Server
  • MOOSE
  • MPICH
  • MRICRON
  • MVAPICH
  • node.js
  • OCTAVE
  • OpenMPI
  • OPENSLIDE
  • PANDOC
  • Perl
  • Plink
  • Python
  • R
  • ROOT
  • STAR
  • Subread
  • Trimmomatic
  • /software/singularity.md
  • Visual Studio Code
  • VNC
  • WORKBENCH
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  • AFNI
  • AMBER
  • ANTS
  • Apptainer
  • CMAKE
  • CUDA
  • CUDNN
  • DCMTK
  • DRAMMS
  • Elastix
  • FastQC
  • FFMPEG
  • FREESURFER
  • FSL
  • GATE
  • GNU C Compiler
  • GEANT4
  • GO
  • GREEDY
  • Intel Compilers
  • ITK-SNAP
  • Jupyter Notebook
  • MATLAB Compiler Runtime
  • MATLAB Interactive
  • MATLAB Parallel Server
  • MOOSE
  • MPICH
  • MRICRON
  • MVAPICH
  • node.js
  • OCTAVE
  • OpenMPI
  • OPENSLIDE
  • PANDOC
  • Perl
  • Plink
  • Python
  • R
  • ROOT
  • STAR
  • Subread
  • Trimmomatic
  • /software/singularity.md
  • Visual Studio Code
  • VNC
  • WORKBENCH
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  • Account
  • Connect
  • FAQs for Accounting
  • Hardware
  • RCIF
  • RCIF Datasets
  • Slurm Basics
  • Software
  • Storage Systems
  • Training and Support

We support a variety of software on the RCIF HPC cluster

  • afni
  • amber
  • ants
  • apptainer
  • cmake
  • cuda
  • cudnn
  • dbus
  • dcmtk
  • dramms
  • elastix
  • fastqc
  • ffmpeg
  • freesurfer
  • fsl
  • gate
  • gcc
  • geant4
  • go
  • greedy
  • intel
  • itk-snap
  • Jupyter Notebook
  • matlabcompilerruntime
  • matlabinteractive
  • matlabparallelserver
  • moose
  • mpich
  • mricron
  • mvapich2
  • node.js
  • octave
  • openmpi
  • openslide
  • pandoc
  • perl
  • plink
  • python
  • r
  • root
  • singularity
  • star
  • subread
  • trimmomatic
  • Visual Studio Code
  • vnc-remotedesktop
  • workbench
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Slurm Basics Storage Systems